Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797876.1_cds_XP_016457081.1_5041
CDS Infomation

[gene=LOC107780969] [db_xref=GeneID:107780969] [protein=protease Do-like 10, mitochondrial] [protein_id=XP_016457081.1] [location=complement(join(18444..18686,18800..18850,19479..19682,20350..20477,20997..21256,21986..22181,23850..24095,24647..25100))] [gbkey=CDS]
Sequence

ATGTTACGAATAGGTTCAACTCTCCGTACAACACGAAAGCTCTTAAACAGAAATCTCCAC
TTTCAGTCCCCTATTATCGCCGGACATGTAGCTCCGGTACATCACCGACGGCAAGAGCTC
CATCGCTTTGTTCGGCGTTGCAATTATAGCAGCACTGTTGGTAATACTTCTGCTTCCGCC
TCATGTTTTTCCACTTTGAGCAACAACAATAGCTCAATAACTTCTACGGCACCTCATGCT
GAGAGAGCTCAGGAAAATGATAGTCTTCGATCCGATGTATCGGAAGTAGAACCGGTGGCG
GTGGAGGAGCAGCGATTAAGTAGTGTAATGGTGGATGCTTATTTAGCAATAGAGCTAGCA
TTGGATTCTGTAGTTAAGATATTCACTGTTTCCAGTAGTCCTAATTACTTCCTTCCATGG
CAGAACAAGTCCCAACGTGAAACTACCGGCTCTGGTTTTGTTATTCCGGGAAAGAGGATC
CTAACAAATGCTCATGTTGTGGCTGATCATACATTTGTACTTGTAAGAAAGCATGGTTCT
CCTACCAAGTATAGAGCAACAGTGCAAGCTGTTGGTCATGAATGTGACTTGGCTATTCTG
GTGGTAGAAAGTGAAGAATTCTGGGAGGGCATGAACTCTTTGGAGCTTGGTGATGTTCCA
TTTCTCCAAGAAGCTGTGGCTGTTGTTGGTTATCCTCAAGGGGGAGATAATATATCTGTG
ACAAAAGGTGTTGTCTCAAGAGTAGAACCTACGCAATATGTACATGGCGCTAGTCAACTA
TTGGCAATACAAATTGATGCGGCTATAAATCCAGGGAATAGTGGAGGACCAGCAATTATG
GTTGACAAAGTTGCTGGAGTTGCTTTCCAAAACCTCTCTGGTGCAGAGAATATTGGCTAC
ATTATTCCTGTTCCTGTGATAAAGCATTTTATAGCTGGAGTAGAAGAACGGGGTGAATAC
GTTGGGTTTTGCTCTCTGGGCTTGTCATGCCAACCTACTGAAAATGCACAAATTCGAGAG
TACTTCCAAATGCAGTCCAAATTGACAGGTGTGCTTGTTAGCCGAATCAACCCACTTTCT
GATGCTTCTAGAGTATTAAAGAAAGACGACATAGTCCTCTCATTTGATGGCGTACCCATA
GCAAATGATGGAACAGTTCCTTTCCGAAACAGAGAGAGGATCACATTTGACCATCTGGTA
TCTATGAAGAAACCTAATGAAACTGCTGAACTTAAAGTCTTGAGAAATGGCGAAGTGCAT
GACTTCAAAATCACGCTTCATCCTTTGCAGCCACTTGTTCCAGTTCATCAATTTGACAAG
CTTCCGAGTTATTTCATTTTTGCTGGTCTCGTCTTTATTCCATTAACTCAACCATTCCTT
CACGAGTATGGAGAAGACTGGTATAATGCCTCACCCCGTAGGTTGTGTGAACGAGCACTT
CGGGAACTACCTAAGAAACCTGGTGAACAATTCATCATCCTTTCTCAGGTGTTGATGGAT
GATATTAATGCTGGTTATGAGCGCCTTGCCGAGTTGCAGGTGAAGAAGGTTAATGGTGTA
GAAGTTTTGAATTTGAAACATTTGCGTCAGCTTGTGGAAGATGGCAACCAAAAGAATGTG
AGATTTGATTTGGATGATGAGAGGGTGATTGTTTTGAATTATGAATCGGCAAGAATAGCC
ACATCGCGTATATTGAAACGCCATAGAATACCTCATGCCATGTCTACTGATCTTACCGAT
GATGAAAATGCAGCTGAACTTCAGTCGGCTTGCTCAAGCTAA

Peptide Sequence

PEP ID

XP_016457081.1
PEP Infomation

PREDICTED: protease Do-like 10, mitochondrial [Nicotiana tabacum]
Sequence

MLRIGSTLRTTRKLLNRNLHFQSPIIAGHVAPVHHRRQELHRFVRRCNYSSTVGNTSASA
SCFSTLSNNNSSITSTAPHAERAQENDSLRSDVSEVEPVAVEEQRLSSVMVDAYLAIELA
LDSVVKIFTVSSSPNYFLPWQNKSQRETTGSGFVIPGKRILTNAHVVADHTFVLVRKHGS
PTKYRATVQAVGHECDLAILVVESEEFWEGMNSLELGDVPFLQEAVAVVGYPQGGDNISV
TKGVVSRVEPTQYVHGASQLLAIQIDAAINPGNSGGPAIMVDKVAGVAFQNLSGAENIGY
IIPVPVIKHFIAGVEERGEYVGFCSLGLSCQPTENAQIREYFQMQSKLTGVLVSRINPLS
DASRVLKKDDIVLSFDGVPIANDGTVPFRNRERITFDHLVSMKKPNETAELKVLRNGEVH
DFKITLHPLQPLVPVHQFDKLPSYFIFAGLVFIPLTQPFLHEYGEDWYNASPRRLCERAL
RELPKKPGEQFIILSQVLMDDINAGYERLAELQVKKVNGVEVLNLKHLRQLVEDGNQKNV
RFDLDDERVIVLNYESARIATSRILKRHRIPHAMSTDLTDDENAAELQSACSS

Transcript Sequence

Gene sequence data has not been registered.